chr3:52451410:G>A Detail (hg38) (TNNC1)

Information

Genome

Assembly Position
hg19 chr3:52,485,426-52,485,426 View the variant detail on this assembly version.
hg38 chr3:52,451,410-52,451,410

HGVS

Type Transcript Protein
RefSeq NM_003280.2:c.435C>T NP_003271.1:p.Asp145=
Ensemble ENST00000232975.8:c.435C>T ENST00000232975.8:p.Asp145=
Summary

MGeND

Clinical significance
Variant entry
GWAS entry
Disease area statistics Show details

Frequency

JP HGVD:[No Data.]
ToMMo:[No Data.]
NCBN:[No Data.]
NCBN(Hondo):[No Data.]
NCBN(Ryukyu):[No Data.]
East asia ExAC:<0.001

Prediction

ClinVar

Clinical Significance Likely benign
Review star
Show details
Links
Type Database ID Link
Gene MIM 191040 OMIM
HGNC 11943 HGNC
Ensembl ENSG00000114854 Ensembl
NCBI NCBI
Gene Cards Gene Cards
OncoKB OncoKB
Type Database ID Link
Variant TogoVar
COSMIC COSM4642798 COSMIC
MONDO
Disease area statistics
[No Data.]
MGeND
[No Data.]
ClinVar
Clinical significance Last evaluated Review status Condition Origin Links
Likely benign 2015-04-09 criteria provided, single submitter not specified germline Detail
Likely benign 2024-01-04 criteria provided, single submitter hypertrophic cardiomyopathy 13,dilated cardiomyopathy 1Z germline Detail
Likely benign 2024-01-04 criteria provided, single submitter hypertrophic cardiomyopathy 13,dilated cardiomyopathy 1Z germline Detail
Likely benign 2023-01-01 criteria provided, multiple submitters, no conflicts not provided germline Detail
Likely benign 2020-12-08 criteria provided, single submitter germline Detail
CIViC
[No Data.]
DisGeNET
Score Disease name Description Source Pubmed Links
0.360 Cardiomyopathy, Familial Hypertrophic, 13 NA CLINVAR Detail
Annotation

Annotations

DescrptionSourceLinks
NM_003280.3(TNNC1):c.435C>T (p.Asp145=) AND not specified ClinVar Detail
NM_003280.3(TNNC1):c.435C>T (p.Asp145=) AND multiple conditions ClinVar Detail
NM_003280.3(TNNC1):c.435C>T (p.Asp145=) AND multiple conditions ClinVar Detail
NM_003280.3(TNNC1):c.435C>T (p.Asp145=) AND not provided ClinVar Detail
NM_003280.3(TNNC1):c.435C>T (p.Asp145=) AND Cardiovascular phenotype ClinVar Detail
NA DisGeNET Detail

Overlapped Transcript Coordinates

Gene Transcript ID Exon Number Chromosome Start Stop Type Amino Mutation Transcript Position Links

Overlapped Transcript

Gene Transcript ID Chromosome Start Stop Links
Gene
-
dbSNP
rs267607124 dbSNP
Genome
hg38
Position
chr3:52,451,410-52,451,410
Variant Type
snv
Reference Allele
G
Alternative Allele
A
East Asian Chromosome Counts (ExAC)
8640
East Asian Allele Counts (ExAC)
0
East Asian Heterozygous Counts (ExAC)
0
East Asian Homozygous Counts (ExAC)
0
East Asian Allele Frequency (ExAC)
0.0
Chromosome Counts in All Race (ExAC)
120586
Allele Counts in All Race (ExAC)
2
Heterozygous Counts in All Race (ExAC)
2
Homozygous Counts in All Race (ExAC)
0
Allele Frequency in All Race (ExAC)
1.658567329540743E-5
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